TMALab Microarray Analysis Tool
Automate Manual Tasks Across Hundreds of Tissue Samples
| Segment Whole Slide Images Use predefined array blocks to automatically segment whole slide images of any standard file format. |
|
| View Spots In Context of Core Rapidly access adjacent sections and compare stains by automatically retrieving corresponding spots across multiple slides. |
|
| Automate Image Analysis Submit batch jobs for server-side image analysis. Analyze entire spots, designate regions and exclusion regions of analysis. |
|
Additional Features and Capabilities of TMALab Include
Design Array Blocks
- Record array layouts and associate clinical data in Spectrum Plus while building the physical array block-before any slides have been scanned.
- Use predefined array blocks to automatically segment whole-slide images.
- Employ an advanced relational database to maintain the relationships between array blocks, specimens, cores, and slides.
- Access serial section ("spot") images associated with any core. Easily retrieve and compare spots across any number of arrays based on search criteria.
- Submit batch jobs for server-side image analysis using any of our analysis packages (IHC nuclear, IHC membrane, color deconvolution and co-localization algorithms). Interface with your existing Image-Pro Plus Macros or build your own custom analysis tools using C++.
- Spot images can be exported in batch mode to TIFF, SVS, or JPEG file formats so that they can be loaded into third-party applications.
- Easily correlate analytical data with clinical information by exporting in batch mode to a variety of standard formats for further statistical analysis: TXT, CSV, Excel.
